CDS

Accession Number TCMCG051C06752
gbkey CDS
Protein Id XP_024450424.1
Location complement(join(4187549..4187552,4187670..4187751,4188045..4188129,4189574..4189691,4190340..4190470,4190603..4190663,4190751..4190847,4191204..4191300,4191413..4191523,4191616..4191633))
Gene LOC7468747
GeneID 7468747
Organism Populus trichocarpa

Protein

Length 267aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024594656.1
Definition tRNA pseudouridine(38/39) synthase isoform X8 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01855        [VIEW IN KEGG]
EC 5.4.99.45        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGACTGGATTTTAAGTCTGAGATTTTCAAGGCTCTTGAAACGACAAGACTTTTAATTGGTGATAGGAAGGAAATACAGTACTCGAGATGTGGTAGAACAGACAAGGGAGTTTCTGCTGTTGGGCAAGTGATTGCACTGTATTTACGATCCAAACTCAAGGACATTGATGCACACAACAAACATTCAGGGGAGACTGTTCCAGAAGAACAGGATGGTCAGCCAGAAGGGGAAATTGATTATGTGAGAGTGTTGAATGGAGTCCTTCCAAAAGACATTCGGATTGTGGGCTGGTGTCCTGTTCCAAGTGACTTCAGTGCAAGGTTCAGCTGTTTGAGCAGGGAATATAAATATTTCTTTTGGAATGACAATTTGAACCTCTTGGTTATGGAGACTGCAGGTAAGAAACTTATTGGGGAACATGACTTCAGAAACTTCTGCAAGATGGATGCAGTGAAGGTGCACAATTATAGGCGAAATGTGATGTCATTTGAGATCTCTCCTTGTGATATGAGATTTGAAGGGCATCAACTTTATGCTATAAAAATTAAAGGTAGTGCTTTCCTGTGGCACCAAGTCCGGTGCATGGTTGCTGTGCTATTTATGATTGGCCAAGGTCTTGAATCCCCTGAAGTAATAGATGCATTACTGGACACCAGGACACTGAGGAAACCCCAGTATCTCATGGCTCCTGAAATTCCGTTGGTTCTTCTATCCTATGCTGGGCAAGCGCTGCATGTTCACTTGGAGAATGAATGCCGACTTTACCATCTCCAGGCTGCTATCTTTCAAGAGGCTCTATAA
Protein:  
MGLDFKSEIFKALETTRLLIGDRKEIQYSRCGRTDKGVSAVGQVIALYLRSKLKDIDAHNKHSGETVPEEQDGQPEGEIDYVRVLNGVLPKDIRIVGWCPVPSDFSARFSCLSREYKYFFWNDNLNLLVMETAGKKLIGEHDFRNFCKMDAVKVHNYRRNVMSFEISPCDMRFEGHQLYAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPEVIDALLDTRTLRKPQYLMAPEIPLVLLSYAGQALHVHLENECRLYHLQAAIFQEAL